SAMSI Computational Neuroscience Summer School 2015

Neural Spike Train Analysis (Day 1)

Lecture for Session 1 - Introduction to point processes:
SAMSI_Introduction_to_Point_Processes.pdf

Lecture for Session 2 - Spike train analysis with GLM:
SAMSI_GLM.pdf

Lecture for Session 3 - GLM Example in MATLAB:
SAMSI_GLM_Example.pdf

MATLAB GLM Examples:
Part 1 - Fitting GLMs: glm_lab1.zip
Part 2 (Homework) - Evaluating models: glm_lab2.zip

Neural Spike Train Analysis (Day 2)

Lecture slides for Session 1
SAMSI_Lecture_1.pdf
MATLAB code for Session 1
MATLAB M-files for Session 1: Modeling_Session_1.m, IF.m
Solution MATLAB M-files for Session 1: Modeling_Session_1_Solution.m, LIF.m

Lecture slides for Session 2
SAMSI_Lecture_2.pdf
MATLAB code for Session 2
MATLAB M-files for Session 2: Modeling_Session_2.m, HH.m

Lecture slides for Session 3
SAMSI_Lecture_3.pdf
XPPAUT code for Session 3
Download XPPAUT ODE-file for Session 3: FHN.ode

Contact: Email Mark Kramer