Selected Online Publications

Monograph:    Probability Distributions in Quantum Statistical Mechanics (PDF)

Papers:  (Available as .pdf unless otherwise specified)

Ensemble machine methods for DNA binding (with Y. Fan, and C. DeLisi),  to appear, International Conference on Machine Learning and Applications 7, 2008.  Algorithm available here.

 

Regulatory analysis for exploring human disease progression (with D. Holloway and C. DeLisi), Biology Direct 3:24, 2008. Algorithm available here.

 

Building transcription factor classifiers and discovering relevant biological features,  (with D. Holloway and C. DeLisi), Biology Direct 3:22, 30 May 2008. Algorithm available here.

 

SVMMotif:  A machine learning motif algorithm (with Y. Fan, D.Holloway and C. DeLisi), International Conference on Machine Learning and Applications 6, 573-580, 2007. Algorithm available here.

 

Learning methods for DNA binding in computational biology (with D. Holloway, et al.) International Joint Conference on Neural Networks,  20, 1605, 2007.

 

Machine learning for regulatory analysis and transcription factor target prediction in yeast (with D. Holloway and C. DeLisi), Systems and Synthetic Biology 1 (2006), 25-46.                                                                                                              

 

Approximating functions in reproducing kernel Hilbert spaces via statistical learning theory (with L.Raphael), in Splines and Wavelets, G. Chen and M.J. Lai, eds, (2006) 270-286

Machine learning methods for transcription data integration (with D. Holloway and C.DeLisi), IBM Journal of Research and Development 50 (2006), 631-644 (Abstract only - Journal link is here)

Information-based nonlinear approximation:  An average case setting (with L. Plaskota),  J. Complexity 21 (2005), 211-228.

Extending Girosi's approximation estimates for functions in Sobolev spaces via statistical learning theory (with L.Raphael and D. Williams), J. Analysis and Applications 3 No. 2 (2005), 67-90.

Statistical likelihood representations of prior knowledge in machine learning (with L, Plaskota and A. Przybyszewski),Artificial Intelligence and Applications, M.H. Hamza, Ed., Innsbruck (2005), 467-472.

Integrating genomicdata to predict transcription factor binding  (with D. Holloway and C. DeLisi), Genome Informatics 16 (2005), 83-94.

Machine learning and statistical MAP methods (with L.Plaskota and A. Przybyszewski), Intelligent Information Processing, Springer, Berlin (2005), 441-445.

On some integrated approaches to inference (with L. Plaskota), technical report, (2005).

Complexity of predictive neural networks (with L. Plaskota) Proceedings of International Conference on Complexity,  Y. Bar-Yam, Ed., Cambridge,MA (2003)

Sup-norm convergence rates of wavelet expansions in Besov Spaces (with L. Raphael), in Applicable Mathematics (2002), 193-203.

Pointwise wavelet convergence in Besov and uniformly local Sobolev Spaces  (with L.Raphael), Journal of Contemporary Mathematical Analysis 36 (2002), 51-68.

Complexity of neural network approximation with limited information:  a worst-case approach (with L. Plaskota), J.Complexity 17 (2001), 345-365.

Convergence rates of multiscale and wavelet expansions (with L. Raphael), in Wavelet Transforms and Time-Frequency Signal Analysis, American Mathematical Society CBMS Volume, L.Debnath, Ed. (2001), 37-65.

A characterization of wavelet convergence in Sobolev spaces (with L. Raphael), Applicable Analysis 78 (2001), 271-324.

Complexity of regularization RBF networks (with L. Plaskota), in Proceedings of International Joint Congress on Neural Networks, INNS, Washington (2001), 342-346.

Review of Complexity and Information, (by J.F. Traub and A.G. Werschulz), Bull. Amer. Math Soc. 37 (2000), 199-204.

Information complexity of neural networks (with L. Plaskota), Neural Networks 13 (2000), 365-376.

Oscillation criteria for delay equations (with Y. Sficas and I. P. Stavroulakis), Proc. Am. Math. Soc. 128 (2000), 2989-2997.

Neural networks, radial basis functions, and complexity (with L. Plaskota), Proceedings of Bialowieza Conference on Statistical Physics, 1997, 122-145.

Exact smoothing properties of Schrodinger semigroups (with A. Gulisashvili), American J. Math. 118 (1996), 1215-1248

Pointwise convergence of wavelet expansions (with S. Kelly and L. Raphael), Bull. Amer. Math. Soc. 30 (1994), 87-94

Local convergence of wavelet expansions (with S. Kelly and L. Raphael), J. Functional Anal. 126 (1994), 102-138

 

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