Department of Mathematics and Statistics
111 Cummington Street, Boston, MA 02215
Phone: (617) 353-5209, Fax: (617) 353-8100
My Computing Blogs
XTricks
TeXTricks
RTricks




QUADRISK: Software for calculating Quadratic Risk
Binary Code for Linux Architecture[QUADRISK_linux]
Binary Code for Unix Architecture[QUADRISK_unix]
Binary Code for MAC OS X Architecture[QUADRISK_osx]
Related Paper: Model selection in High-Dimensions: A Quadratic-risk Based Approach S. Ray and B.G. Lindsay [To appear in the Journal of the Royal Statistical Society - Series B]
pdf | ps | arxiv
README file
PDF Documentation file

HMAC: Software for Hiererchical Modal Clustering
Download the package [Installation instructions included]
PDF Documentation
Matlab codes
R codes
Related paper A Nonparametric Statistical Approach to Clustering via Mode Identification Jia Li, Surajit Ray and Bruce G Lindsay and [ Journal of Machine Learning Research 8(Aug):1687--1723, 2007 ]
pdf | Journal Page
MODALITY: Software for finding the number of modes of a multivariate normal
R-Code with a set of functions[modality.r]

MHCPROP: Software for MHC binder prediction based on biophysiochemical properties
R-Code for conversion of peptide sequence Data to peptide Biophyiscal property values [mhcpropbinder.r]
R-Code for variable selection based on misclassification error [varsel.r]
Property values for amino acid used in this paper [properties.dat], [ properties.xls includes refernces]
Example peptide Sequence data [peptideYN.dat]
PDIV: Generalized Power Divergence Statistics
R-Code and the corresponding Readme document;